Man pages for aertslab/SCENIC
SCENIC (Single Cell rEgulatory Network Inference and Clustering)

defaultDbNamesDefault databases by organism
export2scopeexport2scope
exportsForGRNBoostexportsForGRNBoost
getDbAnnotationsgetDbAnnotations
getDbTfsgetDbTfs
getRegulonNamegetRegulonName
getTFgetTF
importGRNBoostResultsimportGRNBoostResults
onlyNonDuplicatedExtendedonlyNonDuplicatedExtended
plotTsne_AUCellAppplotTsne_AUCellApp
plotTsne_compareSettingsplotTsne_compareSettings
plotTsne_regulonActivityHTMLplotTsne_AUCell
plotTsne_rgbplotTsne_rgb
regulon_plotExpressionregulon_plotExpression
runGenie3runGenie3
runSCENIC_1_coexNetwork2modulesrunSCENIC_1_coexNetwork2modules
runSCENIC_2_createRegulonsrunSCENIC_2_createRegulons
runSCENIC_3_scoreCellsrunSCENIC_3_scoreCells
runSCENIC_4_aucell_binarizerunSCENIC_4_aucell_binarize
ScenicOptions-classObject to store SCENIC settings
tsneAUCtsneAUC
aertslab/SCENIC documentation built on June 23, 2018, 4:30 a.m.