importArboreto: importArboreto
In aertslab/SCENIC: SCENIC (Single Cell rEgulatory Network Inference and Clustering)
View source: R/aux_importsFromPython.R
importArboreto R Documentation
importArboreto
Description
Import output from Arboreto/GRNBoost (https://arboreto.readthedocs.io)
Usage
importArboreto(
fileName,
reorder = TRUE,
normalizeImportance = TRUE,
lapplyFun = BiocParallel::bplapply
)
Arguments
fileName
File name of the link/adjacency list
reorder
Whether to sort the links by decreasing weight/importance
See Also
pySCENIC (https://pyscenic.readthedocs.io)
Examples
GRNBoost_linkList <- importArboreto("adjacencies.tsv")
aertslab/SCENIC documentation built on April 7, 2024, 10 a.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
View source: R/aux_importsFromPython.R
| importArboreto | R Documentation |
importArboreto
Description
Import output from Arboreto/GRNBoost (https://arboreto.readthedocs.io)
Usage
importArboreto(
fileName,
reorder = TRUE,
normalizeImportance = TRUE,
lapplyFun = BiocParallel::bplapply
)
Arguments
fileName |
File name of the link/adjacency list |
reorder |
Whether to sort the links by decreasing weight/importance |
See Also
pySCENIC (https://pyscenic.readthedocs.io)
Examples
GRNBoost_linkList <- importArboreto("adjacencies.tsv")
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.