Files in aertslab/SCENIC
SCENIC (Single Cell rEgulatory Network Inference and Clustering)

.Rbuildignore
.gitignore
DESCRIPTION
LICENSE
NAMESPACE
NEWS
R/aux_export2scope.R R/aux_exportsForGRNBoost.R R/class_ScenicOptions.R R/data_exports.R R/plotTsne_AUCell.R R/plotTsne_AUCellApp.R R/plotTsne_compareSettings.R R/plotTsne_rgb.R R/priv_openDev.R R/regulonNames.getRegulonName.R R/regulonNames.getTF.R R/regulonNames.onlyNonDuplicatedExtended.R R/regulon_expressionHeatmap.R R/runGenie3.R R/runSCENIC_1_coexNetwork2modules.R R/runSCENIC_2_createRegulons.R R/runSCENIC_3_scoreCells.R R/runSCENIC_4_aucell_binarize.R R/tsneAUC.R README.md
data/defaultDbNames.RData
inst/CITATION
inst/doc/SCENIC_Running.html
inst/doc/SCENIC_Setup.html
inst/doc/detailedStep_1_coexNetwork2modules.html
inst/doc/detailedStep_2_createRegulons.html
inst/doc/detailedStep_3_scoreCells.html
inst/doc/detailedStep_4_aucell_binarize.html
man/ScenicOptions-class.Rd man/defaultDbNames.Rd man/export2scope.Rd man/exportsForGRNBoost.Rd man/getDbAnnotations.Rd man/getDbTfs.Rd man/getRegulonName.Rd man/getTF.Rd man/importGRNBoostResults.Rd man/onlyNonDuplicatedExtended.Rd man/plotTsne_AUCellApp.Rd man/plotTsne_compareSettings.Rd man/plotTsne_regulonActivityHTML.Rd man/plotTsne_rgb.Rd man/regulon_plotExpression.Rd man/runGenie3.Rd man/runSCENIC_1_coexNetwork2modules.Rd man/runSCENIC_2_createRegulons.Rd man/runSCENIC_3_scoreCells.Rd man/runSCENIC_4_aucell_binarize.Rd man/tsneAUC.Rd vignettes/SCENIC_Running.Rmd vignettes/SCENIC_Setup.Rmd
vignettes/cell.csl
vignettes/corrected.css
vignettes/detailedStep_1_coexNetwork2modules.Rmd vignettes/detailedStep_2_createRegulons.Rmd vignettes/detailedStep_3_scoreCells.Rmd vignettes/detailedStep_4_aucell_binarize.Rmd
vignettes/references.bib
aertslab/SCENIC documentation built on Aug. 31, 2018, 2:09 p.m.