dotHeatmap: dotHeatmap

In aertslab/SCENIC: SCENIC (Single Cell rEgulatory Network Inference and Clustering)

dotHeatmap

Description

Plots a dot-heatmap for enrichment results

Usage

dotHeatmap(
  enrichmentDf,
  var.x = "Topic",
  var.y = "ID",
  var.col = "FC",
  col.low = "dodgerblue",
  col.mid = "floralwhite",
  col.high = "brown1",
  var.size = "p.adjust",
  min.size = 1,
  max.size = 8,
  ...
)

Arguments

enrichmentDf	Input data.frame
var.x	Variable (column) for the X axis
var.y	Variable (column) for the Y axis
var.col	Variable (column) that will determine the color of the dots
col.low	Lower value color
col.mid	Mid value color
col.high	High value color
var.size	Variable (column) that will determine the dot size
min.size	Minimum dot size
max.size	Maximum dot size
...	Other arguments to pass to ggplot's theme()

Value

A ggplot object

Examples

# TODO

aertslab/SCENIC documentation built on April 7, 2024, 10 a.m.