getTF: getTF
In aertslab/SCENIC: SCENIC (Single Cell rEgulatory Network Inference and Clustering)
getTF R Documentation
getTF
Description
Returns the TF associated to a regulon name (e.g. removes the #genes sufix)
Usage
getTF(regulonName, sep = "\\s")
Arguments
regulonName
Character vector containing regulon names
sep
Character used to separate the TF name (as regexpr), if different from space.
Details
...
Value
Character vector containing the TF (including the "_extended" sufix if appropiate)
See Also
List of vignettes included in the package: vignette(package="SCENIC")
Examples
reguNames <- c("Dlx1 (103g)", "Dlx1_extended (190g)", "Olig2_extended (29g)", "Sox9 (17g)")
getTF(reguNames)
aertslab/SCENIC documentation built on April 7, 2024, 10 a.m.
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| getTF | R Documentation |
getTF
Description
Returns the TF associated to a regulon name (e.g. removes the #genes sufix)
Usage
getTF(regulonName, sep = "\\s")
Arguments
regulonName |
Character vector containing regulon names |
sep |
Character used to separate the TF name (as regexpr), if different from space. |
Details
...
Value
Character vector containing the TF (including the "_extended" sufix if appropiate)
See Also
List of vignettes included in the package: vignette(package="SCENIC")
Examples
reguNames <- c("Dlx1 (103g)", "Dlx1_extended (190g)", "Olig2_extended (29g)", "Sox9 (17g)")
getTF(reguNames)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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