getDbAnnotations: getDbAnnotations
In aertslab/SCENIC: SCENIC (Single Cell rEgulatory Network Inference and Clustering)
View source: R/runSCENIC_2_createRegulons.R
getDbAnnotations R Documentation
getDbAnnotations
Description
Loads the motif annotation
Usage
getDbAnnotations(scenicOptions)
Arguments
scenicOptions
Fields used:
If scenicOptions@settings$db_annotFiles is set, it will load these files.
Otherwise, will load the default RcisTarget annotations based on 'scenicOptions@inputDatasetInfo$org', and 'scenicOptions@settings$db_mcVersion'
Value
The motif annotations
Examples
getDbAnnotations(scenicOptions)
aertslab/SCENIC documentation built on April 7, 2024, 10 a.m.
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View source: R/runSCENIC_2_createRegulons.R
| getDbAnnotations | R Documentation |
getDbAnnotations
Description
Loads the motif annotation
Usage
getDbAnnotations(scenicOptions)
Arguments
scenicOptions |
Fields used: If scenicOptions@settings$db_annotFiles is set, it will load these files. Otherwise, will load the default RcisTarget annotations based on 'scenicOptions@inputDatasetInfo$org', and 'scenicOptions@settings$db_mcVersion' |
Value
The motif annotations
Examples
getDbAnnotations(scenicOptions)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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