Files in andigoni/MeinteR
A framework to prioritize DNA methylation aberrations based on conformational and cis-regulatory element enrichment
.Rapp.history
.Rbuildignore
.gitignore
DESCRIPTION
LICENSE
MeinteR.Rproj
NAMESPACE
R/misc.R
R/quadromes.R
R/shapes.R
R/splicing.R
R/transf.R
README.md
_config.yml
data/.Rapp.history
data/TFclass.rda
data/cTF.rda
data/cpgIslands.rda
data/refFreq.rda
data/sample.rda
data/test.data.rda
dist/MeinteR_0.99.0.tar.gz
dist/MeinteR_0.99.0.tgz
inst/NEWS
man/.Rapp.history
man/TF.class.Rd
man/bed2Seq.Rd
man/cTF.Rd
man/cpgIslands.Rd
man/filterByCGI.Rd
man/filterByProm.Rd
man/findAltSplicing.Rd
man/findConservedTFBS.Rd
man/findPals.Rd
man/findQuads.Rd
man/findShapes.Rd
man/findSpliceSites.Rd
man/findTFBS.Rd
man/importGEO.Rd
man/importLimma.Rd
man/isEmptyDF.Rd
man/loadFile.Rd
man/loadSeqGEO.Rd
man/meinter.Rd
man/nameStudy.Rd
man/plotBeta.Rd
man/plotCpG.Rd
man/plotTF.Rd
man/refFreq.Rd
man/reorderBed.Rd
man/sample.Rd
man/scatterConsTF.Rd
man/test.data.Rd
man/validateBed.Rd
tests/testthat.R
tests/testthat/test_packages.R
vignettes/GSE32866_annotation.csv
vignettes/GSE66695_annotation.csv
vignettes/Human_genes__GRCh37_p13_.rda
vignettes/MeinteR.bib
vignettes/MeinteR.pdf
vignettes/Meinter_vignette.R
vignettes/Meinter_vignette.Rmd
vignettes/Meinter_vignette.fls
vignettes/Meinter_vignette.md
vignettes/Meinter_vignette.pdf
vignettes/UseCase1.Rmd
vignettes/UseCase2.Rmd
vignettes/UseCase3.Rmd
vignettes/bibl.csl
vignettes/demoRun.R
vignettes/figs/figure1.png
vignettes/figs/figure10.png
vignettes/figs/figure11.png
vignettes/figs/figure2.png
vignettes/figs/figure3.png
vignettes/figs/figure4.png
vignettes/figs/figure6.jpg
vignettes/figs/figure7.png
vignettes/figs/figure8.png
vignettes/figs/figure9.png
vignettes/figs/meinter.png
vignettes/rsconnect/documents/Meinter_vignette.md/rpubs.com/rpubs/Document.dcf
vignettes/rsconnect/documents/Meinter_vignette.md/rpubs.com/rpubs/Publish Document.dcf
