bed2Seq: Fetch sequences from bed-formatted data frames

Description Usage Arguments Value

View source: R/misc.R

Description

Fetch sequences from bed-formatted data frames

Usage

1
bed2Seq(bedline, offset)

Arguments

bedline

Valid bed-formatted data frame

offset

Number of nucleotides expanded on each side ([1,1000])

Value

A DNAStringset containing the sequences in hg19 genome assembly


andigoni/MeinteR documentation built on Aug. 20, 2019, 8:43 a.m.