sub-.genotypes: Indexing into a 'genotypes' object

In andrewparkermorgan/argyle: Basic interface and QC for genotypes from Illumina Infinium arrays

Description

Allows indexing into a genotype matrix, trimming marker and sample metadata, filters, and intensity matrices accordingly.

Usage

## S3 method for class 'genotypes'
x[i, j, ..., drop = FALSE]

Arguments

x	an object of class genotypes
i	row index (logical, character, or numeric), recycled if needed
j	column index (logical, character, or numeric), recycled if needed
...	ignored
drop	allow reduction of the dimensions of x if i,j are of length 1?

Value

a genotypes object, preserving any attributes

Examples

## Not run: 
geno[ 1:10, ]
geno[ ,c("sample1","sample2") ]

## End(Not run)

andrewparkermorgan/argyle documentation built on May 10, 2019, 11:08 a.m.