create_maplot: Create MA plot
In anilchalisey/parseR: Pipeline for Analysis of RNA-seq in R

Function to create Mean-Average (Bland-Altmann) plots showing the log-fold changes in gene expression versus the average expression of that gene.

1	create_maplot(res, analysis = "limma")

`res`	The output of either `run_edger`, `run_limma`, or `run_deseq2`.
`analysis`	The analysis method - one of "edger", "voom", or "deseq2".

MA plot in PNG and PDF formats.

## Not run: 
create_maplot(results, analysis = "edger")

## End(Not run)

anilchalisey/parseR documentation built on May 7, 2019, 7:45 a.m.

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