create_pca: Create principal component analysis plot from DDS object

In anilchalisey/parseR: Pipeline for Analysis of RNA-seq in R

Description

Function to create a PCA plot from a DDS object

Usage

create_pca(dds)

Arguments

dds	DESeq2 dds object created by DESeqDataSetFromMatrix.

Value

PCA plot in PNG and PDF formats.

Examples

## Not run: 
load(system.file("data", "ddsMat.rda", package = "dealr"))
create_pca(ddsMat)

## End(Not run)

anilchalisey/parseR documentation built on May 7, 2019, 7:45 a.m.