loadDnaFasta: Simple wrapper around seqinr::read.fasta for DNA data....
In asishallab/GeneFamilies: Analyses different properties of gene families
loadDnaFasta R Documentation
Simple wrapper around seqinr::read.fasta for DNA data. Function deletes gene
descriptions following the first blank character after the gene accession.
For example the name '>AT1G12345 crazy horse gymnast gene' becomes
'AT1G12345'.
Description
Simple wrapper around seqinr::read.fasta for DNA data. Function deletes gene
descriptions following the first blank character after the gene accession.
For example the name '>AT1G12345 crazy horse gymnast gene' becomes
'AT1G12345'.
Usage
loadDnaFasta(path.2.dna.fasta, sanitize.names = TRUE)
Arguments
path.2.dna.fasta
The valid file path to the FASTA file to read in.
sanitize.names
If TRUE, the default, gene descriptions following the
first blank after the gene accessions are discarded.
Value
An instance of base::list as returned by seqinr::read.fasta
asishallab/GeneFamilies documentation built on May 22, 2023, 11:30 a.m.
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| loadDnaFasta | R Documentation |
Simple wrapper around seqinr::read.fasta for DNA data. Function deletes gene descriptions following the first blank character after the gene accession. For example the name '>AT1G12345 crazy horse gymnast gene' becomes 'AT1G12345'.
Description
Simple wrapper around seqinr::read.fasta for DNA data. Function deletes gene descriptions following the first blank character after the gene accession. For example the name '>AT1G12345 crazy horse gymnast gene' becomes 'AT1G12345'.
Usage
loadDnaFasta(path.2.dna.fasta, sanitize.names = TRUE)
Arguments
path.2.dna.fasta |
The valid file path to the FASTA file to read in. |
sanitize.names |
If TRUE, the default, gene descriptions following the first blank after the gene accessions are discarded. |
Value
An instance of base::list as returned by seqinr::read.fasta
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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