plotTissueSpecificExpressionProfileDistanceDistribs: Plots horizontal boxplots of per tissue distributions of...

In asishallab/GeneFamilies: Analyses different properties of gene families

Plots horizontal boxplots of per tissue distributions of expression profile distances. Draws a line from each upper Whisker to the next in order to highlight the hourglass shape. Tissues must be given in the order according to a plant's life.

Description

Plots horizontal boxplots of per tissue distributions of expression profile distances. Draws a line from each upper Whisker to the next in order to highlight the hourglass shape. Tissues must be given in the order according to a plant's life.

Usage

plotTissueSpecificExpressionProfileDistanceDistribs(plot.df, tissues,
  gene.classes, pdf.path, plot.title = "")

Arguments

plot.df	A data.frame with the following columns: 'Tissue', 'Gene.Class', 'Value'.
tissues	A character vector of tissues held in plot.df$Tissue. The order found in this argument will be the order on the Y-Axis of the horizontal plot.
gene.classes	A character vector of gene.classes to group paired boxplots by. Must be of length 2.
pdf.path	The valid file path to the PDF in which the horizontal boxplot is to be stored.
plot.title	A string defining the headline printedabove the plot. See argument main in function base::boxplot for more details. Default is ''.

Value

The output of dev.off()

asishallab/GeneFamilies documentation built on May 22, 2023, 11:30 a.m.