removeExpressionVariant: Modifies the argument 'gene.ids' by deleting expression...

In asishallab/GeneFamilies: Analyses different properties of gene families

Modifies the argument gene.ids by deleting expression variant identifiers and removing resulting duplicate gene IDs. See base::sub for more details.

Description

Modifies the argument gene.ids by deleting expression variant identifiers and removing resulting duplicate gene IDs. See base::sub for more details.

Usage

removeExpressionVariant(gene.ids,
  reg.ex = getOption("GeneFamilies.expression.variant.regex",
  "\\.\\d+$"))

Arguments

gene.ids	a character vector of gene identifiers.
reg.ex	the regular expression used to identify the to be deleted expression variant part of a gene ID. Default is getOption('GeneFamilies.expression.variant.regex', '\.\d+$').

Value

The modified gene IDs with the expression variant parts deleted.

asishallab/GeneFamilies documentation built on May 22, 2023, 11:30 a.m.