Files in ben-laufer/DMRichR
Enrich your DMR Analysis with the Tidyverse
.Rbuildignore
.github/.gitignore
.github/workflows/check-bioc.yml
.github/workflows/pr-commands.yaml
.gitignore
DESCRIPTION
LICENSE
NAMESPACE
R/DM.R
R/DMRich.R
R/DMRichR-package.R
R/HOMER.R
R/LOLA.R
R/annotate.R
R/annotationDatabases.R
R/geneOntology.R
R/globalPlots.R
R/globalStats.R
R/helperFunctions.R
R/imprintOverlap.R
R/methylLearn.R
R/plotDMRs2.R
R/processBismark.R
R/smoothHeatmap.R
R/utils-pipe.R
README.md
_pkgdown.yml
exec/DM.R
exec/DM.R.sh
exec/HOMER.sh
inst/CITATION
man/CGi.Rd
man/CpGs.Rd
man/DM.R.Rd
man/DMReport.Rd
man/DMRichCpG.Rd
man/DMRichGenic.Rd
man/DMRichPlot.Rd
man/DMRichR.Rd
man/DMparseR.Rd
man/GOfuncR.Rd
man/GOplot.Rd
man/HOMER.Rd
man/Manhattan.Rd
man/PCA.Rd
man/annotateRegions.Rd
man/annotationDatabases.Rd
man/arrayLift.Rd
man/chromHMM.Rd
man/chromHMM_heatmap.Rd
man/densityPlot.Rd
man/dmrList.Rd
man/dot-onAttach.Rd
man/extend.Rd
man/figures/dmr_example.png
man/figures/dmrichr_flowchart.png
man/figures/logo.png
man/getBackground.Rd
man/getCpGs.Rd
man/getExons.Rd
man/gg_color_hue.Rd
man/globalStats.Rd
man/gr2bed.Rd
man/imprintOverlap.Rd
man/methylLearn.Rd
man/pipe.Rd
man/plotDMRs2.Rd
man/prepareHOMER.Rd
man/processBismark.Rd
man/read_excel_all.Rd
man/roadmap.Rd
man/roadmap_heatmap.Rd
man/slimGO.Rd
man/smooth2txt.Rd
man/smoothPheatmap.Rd
man/windows.Rd
pkgdown/favicon/apple-touch-icon-120x120.png
pkgdown/favicon/apple-touch-icon-152x152.png
pkgdown/favicon/apple-touch-icon-180x180.png
pkgdown/favicon/apple-touch-icon-60x60.png
pkgdown/favicon/apple-touch-icon-76x76.png
pkgdown/favicon/apple-touch-icon.png
pkgdown/favicon/favicon-16x16.png
pkgdown/favicon/favicon-32x32.png
pkgdown/favicon/favicon.ico
vignettes/DMRichR.rmd
