chromHMM: Chromatin state enrichments
In ben-laufer/DMRichR: Enrich your DMR Analysis with the Tidyverse
chromHMM R Documentation
Chromatin state enrichments
Description
Perfom enrichment testing against the ChromHMM 15-state model for hg38
using LOLA
Usage
chromHMM(sigRegions = sigRegions, regions = regions, cores = cores)
Arguments
sigRegions
A GRanges object of significant regions
regions
A GRanges object of background regions
cores
An integer of how many cores to use
Details
chromHMM
Value
A tibble of enrichment results
ben-laufer/DMRichR documentation built on Oct. 1, 2023, 7:25 a.m.
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| chromHMM | R Documentation |
Chromatin state enrichments
Description
Perfom enrichment testing against the ChromHMM 15-state model for hg38
using LOLA
Usage
chromHMM(sigRegions = sigRegions, regions = regions, cores = cores)
Arguments
sigRegions |
A |
regions |
A |
cores |
An integer of how many cores to use |
Details
chromHMM
Value
A tibble of enrichment results
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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