Q3_Normalization: Q3_Normalization
In bimberlabinternal/CellMembrane: A package with high-level wrappers and pipelines for single-cell RNA-seq tools
Q3_Normalization R Documentation
Q3_Normalization
Description
a normalization method that uses the 75th percentile to find size factors for data normalization.
Usage
Q3_Normalization(seuratObj, assay = "RNA", targetAssayName = "Q3")
Arguments
seuratObj
The Seurat object that holds the data to be normalized.
assay
The assay holding the raw data - the counts slot will be assumed to hold raw data.
targetAssayName
The assay name that the normalized data should be stored in.
Value
Returns a Seurat object containing normalized counts stored in the counts slot of the Q3 assay.
bimberlabinternal/CellMembrane documentation built on Oct. 16, 2024, 6:53 a.m.
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| Q3_Normalization | R Documentation |
Q3_Normalization
Description
a normalization method that uses the 75th percentile to find size factors for data normalization.
Usage
Q3_Normalization(seuratObj, assay = "RNA", targetAssayName = "Q3")
Arguments
seuratObj |
The Seurat object that holds the data to be normalized. |
assay |
The assay holding the raw data - the counts slot will be assumed to hold raw data. |
targetAssayName |
The assay name that the normalized data should be stored in. |
Value
Returns a Seurat object containing normalized counts stored in the counts slot of the Q3 assay.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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