Q3_Normalization: Q3_Normalization

View source: R/Spatial.R

Q3_NormalizationR Documentation

Q3_Normalization

Description

a normalization method that uses the 75th percentile to find size factors for data normalization.

Usage

Q3_Normalization(seuratObj, assay = "RNA", targetAssayName = "Q3")

Arguments

seuratObj

The Seurat object that holds the data to be normalized.

assay

The assay holding the raw data - the counts slot will be assumed to hold raw data.

targetAssayName

The assay name that the normalized data should be stored in.

Value

Returns a Seurat object containing normalized counts stored in the counts slot of the Q3 assay.


bimberlabinternal/CellMembrane documentation built on Dec. 25, 2024, 8:10 a.m.