RunCsCore: Run CS-CORE
In bimberlabinternal/CellMembrane: A package with high-level wrappers and pipelines for single-cell RNA-seq tools
RunCsCore R Documentation
Run CS-CORE
Description
This will run CS-CORE on the default assay
Usage
RunCsCore(
seuratObj,
genes_selected = Seurat::VariableFeatures(seuratObj),
saveFile = NULL
)
Arguments
seuratObj
A Seurat object.
genes_selected
Passed directly to CSCORE::CSCORE()
saveFile
An optional file to save an RDS of the CS-CORE results
Value
The results after WGCNA
bimberlabinternal/CellMembrane documentation built on Nov. 15, 2024, 9:34 p.m.
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| RunCsCore | R Documentation |
Run CS-CORE
Description
This will run CS-CORE on the default assay
Usage
RunCsCore(
seuratObj,
genes_selected = Seurat::VariableFeatures(seuratObj),
saveFile = NULL
)
Arguments
seuratObj |
A Seurat object. |
genes_selected |
Passed directly to CSCORE::CSCORE() |
saveFile |
An optional file to save an RDS of the CS-CORE results |
Value
The results after WGCNA
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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