RunSeuratWnn: Perform Seurat WNN on CiteSeq
In bimberlabinternal/CellMembrane: A package with high-level wrappers and pipelines for single-cell RNA-seq tools
RunSeuratWnn R Documentation
Perform Seurat WNN on CiteSeq
Description
Perform Seurat WNN on CiteSeq
Usage
RunSeuratWnn(
seuratObj,
dims.list = list(1:30, 1:18),
assayName = "ADT",
reduction.list = list("pca", paste0("pca.", tolower(assayName)))
)
Arguments
seuratObj
The seurat object
dims.list
Passed directly to Seurat::FindMultiModalNeighbors
assayName
The assay to use
reduction.list
Passed directly to Seurat::FindMultiModalNeighbors
bimberlabinternal/CellMembrane documentation built on Oct. 16, 2024, 6:53 a.m.
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| RunSeuratWnn | R Documentation |
Perform Seurat WNN on CiteSeq
Description
Perform Seurat WNN on CiteSeq
Usage
RunSeuratWnn(
seuratObj,
dims.list = list(1:30, 1:18),
assayName = "ADT",
reduction.list = list("pca", paste0("pca.", tolower(assayName)))
)
Arguments
seuratObj |
The seurat object |
dims.list |
Passed directly to Seurat::FindMultiModalNeighbors |
assayName |
The assay to use |
reduction.list |
Passed directly to Seurat::FindMultiModalNeighbors |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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