getNodePositionTable: Get position of nodes in cytoscape diagram. .
In biodev/packageDir: Tool for in silico functional analysis design and exploration of relation between genomic function and aberration.
Description
Usage
Arguments
Value
View source: R/biopaxToCytoscape.R
Description
Gets a table with the positions of all the nodes.
Usage
1
getNodePositionTable(nodeTable, attval, attname, w)
Arguments
nodeTable
The table of nodes
attval
Used to get positions of a subset of nodes. Ex: if the attname is cellularLocation, and the attval is cell_membrane, the nodes with the cellularLocation attribute set to cell_membrane would be returned.
attname
The name of the attribute to filter the nodes by
w
The cytoscape window connection object.
Value
data table with three columns: node id, x position, y postion
biodev/packageDir documentation built on Nov. 4, 2019, 7:19 a.m.
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Description Usage Arguments Value
View source: R/biopaxToCytoscape.R
Description
Gets a table with the positions of all the nodes.
Usage
1 | getNodePositionTable(nodeTable, attval, attname, w)
|
Arguments
nodeTable |
The table of nodes |
attval |
Used to get positions of a subset of nodes. Ex: if the attname is cellularLocation, and the attval is cell_membrane, the nodes with the cellularLocation attribute set to cell_membrane would be returned. |
attname |
The name of the attribute to filter the nodes by |
w |
The cytoscape window connection object. |
Value
data table with three columns: node id, x position, y postion
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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