getTestPathSummaryRunner: Returns an example of the PathSummaryRunner reference class...
In biodev/packageDir: Tool for in silico functional analysis design and exploration of relation between genomic function and aberration.
Description
Usage
Arguments
Value
View source: R/testAndDefaultDataScripts.R
Description
Returns an object of the PathSummaryRunner reference class used by summaryTable.
Usage
1
getTestPathSummaryRunner(pths = NULL, pathIds = "Abacavir metabolism")
Arguments
pths
A Path_Detail object. If left null, (the default), the default reactome pathways will be automatically provided.
pathIds
A character vector containing the name(s) of paths to be artificially enriched.
Value
An instance of the PathSummaryRunner class, loaded with data indicating enrichment of the "Abacavir metabolism" Reactome pathway.
biodev/packageDir documentation built on Nov. 4, 2019, 7:19 a.m.
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Description Usage Arguments Value
View source: R/testAndDefaultDataScripts.R
Description
Returns an object of the PathSummaryRunner reference class used by summaryTable.
Usage
1 | getTestPathSummaryRunner(pths = NULL, pathIds = "Abacavir metabolism")
|
Arguments
pths |
A |
pathIds |
A |
Value
An instance of the PathSummaryRunner class, loaded with data indicating enrichment of the "Abacavir metabolism" Reactome pathway.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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