getReactomeIds: Get reactome database ids, give reactome path ids.

In biodev/packageDir: Tool for in silico functional analysis design and exploration of relation between genomic function and aberration.

Description

Get reactome database ids, give reactome path ids. Used in forming URL strings to download biopax files.

Usage

getReactomeIds(pnames)

Arguments

pnames

A vector of pathway names

Value

A two column data frame; columns pid (path name) and dbid (database id). Row names are set as path names.

biodev/packageDir documentation built on Nov. 4, 2019, 7:19 a.m.