getTestPGM: Get an example patient gene matrix
In biodev/packageDir: Tool for in silico functional analysis design and exploration of relation between genomic function and aberration.
View source: R/testAndDefaultDataScripts.R
Description
Retreives from package data a patient gene matrix with corresponds with the Reactome pathway, 'Abacavir metabolism' being completely enriched in active (mutated, drug sensitive, etc.) genes.
Usage
1
Value
matrix object with column names set as patient IDs, row names set as HUGO gene symbols, and logical cell values indicating if the corresponding gene is active in the corresponding patient.
biodev/packageDir documentation built on Nov. 4, 2019, 7:19 a.m.
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View source: R/testAndDefaultDataScripts.R
Description
Retreives from package data a patient gene matrix with corresponds with the Reactome pathway, 'Abacavir metabolism' being completely enriched in active (mutated, drug sensitive, etc.) genes.
Usage
1 |
Value
matrix object with column names set as patient IDs, row names set as HUGO gene symbols, and logical cell values indicating if the corresponding gene is active in the corresponding patient.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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