Transcripts-class: Container for storing CDS near a sequence junction

identifierR Documentation

Container for storing CDS near a sequence junction

Description

Container for storing CDS near a sequence junction

Usage

identifier(object)

Transcripts(
  tA = GRangesList(),
  tB = GRangesList(),
  tC = GRangesList(),
  tD = GRangesList(),
  id = character()
)

## S4 method for signature 'Transcripts'
identifier(object)

## S4 replacement method for signature 'Transcripts'
identifier(object) <- value

## S4 method for signature 'Transcripts,ANY,ANY'
x[[i, j, ..., drop = FALSE]]

## S4 replacement method for signature 'Transcripts,ANY,ANY,GRangesList'
x[[i, j]] <- value

Arguments

x

a Transcripts object

i

integer vector

j

integer vector

...

ignored

drop

ignored

Slots

tA

a GRangesList

tB

a GRangesList

tC

a GRangesList

tD

a GRangesList

id

sample id

Examples

Transcripts()

cancer-genomics/trellis documentation built on Aug. 20, 2024, 5:48 p.m.