is_valid_splits: Check that the split reads available for each rearrangement...
In cancer-genomics/trellis: Somatic structural variant analysis
View source: R/rearlist-utils.R
is_valid_splits R Documentation
Check that the split reads available for each rearrangement span both sides of the sequence junction
Description
Check that the split reads available for each rearrangement span both sides of the sequence junction
Usage
is_valid_splits(rlist, maxgap = 100)
Arguments
rlist
a RearrangementList
maxgap
length-one numeric vector passed to subsetByOverlaps
Value
logical vector of the same length as rlist
cancer-genomics/trellis documentation built on Feb. 2, 2023, 7:04 p.m.
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View source: R/rearlist-utils.R
| is_valid_splits | R Documentation |
Check that the split reads available for each rearrangement span both sides of the sequence junction
Description
Check that the split reads available for each rearrangement span both sides of the sequence junction
Usage
is_valid_splits(rlist, maxgap = 100)
Arguments
rlist |
a |
maxgap |
length-one numeric vector passed to |
Value
logical vector of the same length as rlist
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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