noPrematureStop: Assess whether there are any premature stop codons
In cancer-genomics/trellis: Somatic structural variant analysis
noPrematureStop R Documentation
Assess whether there are any premature stop codons
Description
For a fusion to be in-frame, we require that the only stop codon is at the 3-prime end of the fusion amino acid sequence.
Usage
noPrematureStop(fusion)
Arguments
fusion
a List created by partitionAASequence
Value
a LogicalList
See Also
partitionAASequence
cancer-genomics/trellis documentation built on Feb. 2, 2023, 7:04 p.m.
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| noPrematureStop | R Documentation |
Assess whether there are any premature stop codons
Description
For a fusion to be in-frame, we require that the only stop codon is at the 3-prime end of the fusion amino acid sequence.
Usage
noPrematureStop(fusion)
Arguments
fusion |
a |
Value
a LogicalList
See Also
partitionAASequence
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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