PhyloMissmap: Utility for turning TOAST superalign.txt into Nexus file
In carolinafishes/toast: Transcriptome Ortholog Alignment Sequence Tools
PhyIntoNex R Documentation
Utility for turning TOAST superalign.txt into Nexus file
Description
Plot function to create a tree sorted missmap plot
Usage
phyloMissmap(missing, tree)
Arguments
missing
missing data object from TOAST
tree
Tree in newick format
...
Optional graphic parameters for formatting
Value
Plots a missmap plot of your data sorted by the tree tips
Author(s)
Alex Dornburg, dornburgalex@gmail.com
Examples
phyloMissmap(missing, tree)
carolinafishes/toast documentation built on June 28, 2023, 8:10 p.m.
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| PhyIntoNex | R Documentation |
Utility for turning TOAST superalign.txt into Nexus file
Description
Plot function to create a tree sorted missmap plot
Usage
phyloMissmap(missing, tree)
Arguments
missing |
missing data object from TOAST |
tree |
Tree in newick format |
... |
Optional graphic parameters for formatting |
Value
Plots a missmap plot of your data sorted by the tree tips
Author(s)
Alex Dornburg, dornburgalex@gmail.com
Examples
phyloMissmap(missing, tree)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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