violinPlot: Feature Expression Violin Plot
In compbiomed/celda: CEllular Latent Dirichlet Allocation
Description
Usage
Arguments
Value
Examples
View source: R/celda_functions.R
Description
Outputs a violin plot for feature expression data.
Usage
1
violinPlot(counts, celda.mod, features)
Arguments
counts
Integer matrix. Rows represent features and columns represent cells.
celda.mod
Celda object of class "celda_G" or "celda_CG".
features
Character vector. Uses these genes for plotting.
Value
Violin plot for each feature, grouped by celda cluster
Examples
1
2
violinPlot(counts = celda.CG.sim$counts,
celda.mod = celda.CG.mod, features = "Gene_1")
compbiomed/celda documentation built on May 25, 2019, 3:58 a.m.
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Description Usage Arguments Value Examples
View source: R/celda_functions.R
Description
Outputs a violin plot for feature expression data.
Usage
1 | violinPlot(counts, celda.mod, features)
|
Arguments
counts |
Integer matrix. Rows represent features and columns represent cells. |
celda.mod |
Celda object of class "celda_G" or "celda_CG". |
features |
Character vector. Uses these genes for plotting. |
Value
Violin plot for each feature, grouped by celda cluster
Examples
1 2 | violinPlot(counts = celda.CG.sim$counts,
celda.mod = celda.CG.mod, features = "Gene_1")
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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