plotScanpyHVG: plotScanpyHVG
In compbiomed/singleCellTK: Comprehensive and Interactive Analysis of Single Cell RNA-Seq Data
View source: R/scanpyFunctions.R
plotScanpyHVG R Documentation
plotScanpyHVG
Description
plotScanpyHVG
Usage
plotScanpyHVG(inSCE, log = FALSE)
Arguments
inSCE
Input SingleCellExperiment object.
log
Plot on logarithmic axes. Default FALSE.
Value
plot object
Examples
data(scExample, package = "singleCellTK")
## Not run:
sce <- runScanpyNormalizeData(sce, useAssay = "counts")
sce <- runScanpyFindHVG(sce, useAssay = "scanpyNormData", method = "seurat")
plotScanpyHVG(sce)
## End(Not run)
compbiomed/singleCellTK documentation built on Feb. 10, 2024, 3:32 a.m.
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View source: R/scanpyFunctions.R
| plotScanpyHVG | R Documentation |
plotScanpyHVG
Description
plotScanpyHVG
Usage
plotScanpyHVG(inSCE, log = FALSE)
Arguments
inSCE |
Input |
log |
Plot on logarithmic axes. Default |
Value
plot object
Examples
data(scExample, package = "singleCellTK")
## Not run:
sce <- runScanpyNormalizeData(sce, useAssay = "counts")
sce <- runScanpyFindHVG(sce, useAssay = "scanpyNormData", method = "seurat")
plotScanpyHVG(sce)
## End(Not run)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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