tests/testthat/test-dropletUtils.R
In compbiomed/singleCellTK: Comprehensive and Interactive Analysis of Single Cell RNA-Seq Data
# QC algorithms for all barcodes, pre-filter
library(singleCellTK)
context("Testing dropletUtils algorithms")
data(scExample, package = "singleCellTK")
test_that(desc = "Testing runBarcodeRankDrops", {
sceres <- runBarcodeRankDrops(inSCE = sce)
expect_equal(length(colData(sceres)$dropletUtils_BarcodeRank_Inflection),ncol(sce))
expect_equal(class(colData(sceres)$dropletUtils_BarcodeRank_Inflection), "integer")
})
compbiomed/singleCellTK documentation built on May 8, 2024, 6:58 p.m.
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# QC algorithms for all barcodes, pre-filter
library(singleCellTK)
context("Testing dropletUtils algorithms")
data(scExample, package = "singleCellTK")
test_that(desc = "Testing runBarcodeRankDrops", {
sceres <- runBarcodeRankDrops(inSCE = sce)
expect_equal(length(colData(sceres)$dropletUtils_BarcodeRank_Inflection),ncol(sce))
expect_equal(class(colData(sceres)$dropletUtils_BarcodeRank_Inflection), "integer")
})
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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