pipeline/utils/install_SaaRclust.R
In daewoooo/SaaRclust: R Package to cluster long sequencing reads into chromosomes to facilitate de novo genome assembly.
#!/usr/bin/env Rscript
#This Rscript installs SaaRclust package from the github repository along with all dependencies.
#author: David Porubsky
Sys.setenv(Renv='PWD')
library(devtools)
source("https://bioconductor.org/biocLite.R")
biocLite("ComplexHeatmap", lib="utils/R-packages")
withr::with_libpaths(new = "utils/R-packages", install_git("git://github.com/daewoooo/SaaRclust.git", branch = "master"), "prefix")
daewoooo/SaaRclust documentation built on May 28, 2019, 7:50 p.m.
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#!/usr/bin/env Rscript
#This Rscript installs SaaRclust package from the github repository along with all dependencies.
#author: David Porubsky
Sys.setenv(Renv='PWD')
library(devtools)
source("https://bioconductor.org/biocLite.R")
biocLite("ComplexHeatmap", lib="utils/R-packages")
withr::with_libpaths(new = "utils/R-packages", install_git("git://github.com/daewoooo/SaaRclust.git", branch = "master"), "prefix")
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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