est_seq_post: Use posterior probabilities to update the estimated...
In dcgerard/updogAlpha: Using Parental Data for Offspring Genotyping
Description
Usage
Arguments
Value
Author(s)
Description
Use posterior probabilities to update the estimated sequencing error.
Usage
1
est_seq_post(opostprob, ocounts, osize)
Arguments
opostprob
The matrix output from up_max_bb
ocounts
The offspring counts of the reference allele.
osize
The offspring total reads.
Value
The updated estimate of the sequencing error rate.
Author(s)
David Gerard
dcgerard/updogAlpha documentation built on May 14, 2019, 3:10 a.m.
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Description Usage Arguments Value Author(s)
Description
Use posterior probabilities to update the estimated sequencing error.
Usage
1 | est_seq_post(opostprob, ocounts, osize)
|
Arguments
opostprob |
The matrix output from up_max_bb |
ocounts |
The offspring counts of the reference allele. |
osize |
The offspring total reads. |
Value
The updated estimate of the sequencing error rate.
Author(s)
David Gerard
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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