Description Usage Arguments Author(s)
Objective function for non-outlier model
1 | good_bb_obj(rho, ocounts, osize, theta, avec, pk)
|
rho |
The overdispersion parameter. |
ocounts |
A vector of non-negative integers. The ith element is the number of reads of the reference allele in the ith child. |
osize |
A vector of positive integers. The ith element is the total number of reads for the ith child. |
theta |
A vector of proportions. The posterior probabilities of each point being ok. |
avec |
The current slice of |
pk |
The parameterspace. |
David Gerard
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