get_q_array: Derive the probabilities of an offspring's genotype given its...
In dcgerard/updogAlpha: Using Parental Data for Offspring Genotyping
Description
Usage
Arguments
Value
Author(s)
Description
Derive the probabilities of an offspring's genotype given its
parental genotypes for all possible combinations of parental and
offspring genotypes.
Usage
1
get_q_array(ploidy)
Arguments
ploidy
A positive integer. The ploidy of the species.
Value
An three-way array of proportions. The (i, j, k)th element
is the probability of an offspring having k - 1 reference
alleles given that parent 1 has i - 1 refrerence alleles and
parent 2 has j - 1 reference alleles. Each dimension of the
array is ploidy + 1. In the dimension names, "A" stands
for the reference allele and "a" stands for any other allele.
Author(s)
David Gerard
dcgerard/updogAlpha documentation built on May 14, 2019, 3:10 a.m.
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Description Usage Arguments Value Author(s)
Description
Derive the probabilities of an offspring's genotype given its parental genotypes for all possible combinations of parental and offspring genotypes.
Usage
1 | get_q_array(ploidy)
|
Arguments
ploidy |
A positive integer. The ploidy of the species. |
Value
An three-way array of proportions. The (i, j, k)th element
is the probability of an offspring having k - 1 reference
alleles given that parent 1 has i - 1 refrerence alleles and
parent 2 has j - 1 reference alleles. Each dimension of the
array is ploidy + 1. In the dimension names, "A" stands
for the reference allele and "a" stands for any other allele.
Author(s)
David Gerard
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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