Description Usage Arguments Author(s)
Gradient of obj_offspring_reparam
.
1 | grad_offspring(ocounts, osize, ploidy, prob_geno, s, ell, r)
|
ocounts |
The observed counts of the refernce allele for each individual. |
osize |
The observed number of reads for each individuals. |
ploidy |
An integer. The ploidy of the species. This is assumed to be the same for each individual. |
prob_geno |
The allele frequencies of the genotypes. See |
s |
We have |
ell |
The logit of the sequencing error rate |
r |
We have |
David Gerard
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