getJasparAnnot: getJasparAnnot
In demuellae/ChrAccR: Analyzing chromatin accessibility data in R
Description
Usage
Arguments
Value
Author(s)
Description
retrieve motif annotation data
Usage
1
getJasparAnnot(ss, type = "humantfs")
Arguments
ss
character vector or JASPAR identifiers
type
annotation type. Currently only "humantfs" (pulls info from humantfs.ccbr.utoronto.ca) is supported
Value
list of data frames of TF annotation (a motif can have multiple annotated TFs)
Author(s)
Fabian Mueller
demuellae/ChrAccR documentation built on Jan. 20, 2020, 3:03 a.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Description Usage Arguments Value Author(s)
Description
retrieve motif annotation data
Usage
1 | getJasparAnnot(ss, type = "humantfs")
|
Arguments
ss |
character vector or JASPAR identifiers |
type |
annotation type. Currently only |
Value
list of data frames of TF annotation (a motif can have multiple annotated TFs)
Author(s)
Fabian Mueller
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.