merge_RCTD_objects: Creates an 'RCTD.replicates' object across multiple 'RCTD'...

In dmcable/RCTD: SpatialeXpressionR: Cell type identification and cell type-specific differential expression in spatial transcriptomics

Creates an RCTD.replicates object across multiple RCTD objects

Description

Creates an RCTD.replicates object across multiple RCTD objects

Usage

merge_RCTD_objects(RCTD.reps, replicate_names, group_ids = NULL)

Arguments

RCTD.reps	a list of multiple RCTD objects to merge into one RCTD.replicates object.
replicate_names	a character vector of names for each replicate provided in RCTD.reps
group_ids	(default constant across replicates) a named integer vector (length number of replicates) containing the group id for each replicate. Names represent the replicate names, and replicates of the same group will be expected to be more similar than replicates across groups.

Value

an RCTD.replicates object, containing each RCTD object in RCTD.reps

dmcable/RCTD documentation built on Feb. 24, 2024, 11:03 p.m.