plot_occur_unthreshold: Barplot of the counts for each cell type
In dmcable/RCTD: SpatialeXpressionR: Cell type identification and cell type-specific differential expression in spatial transcriptomics
plot_occur_unthreshold R Documentation
Barplot of the counts for each cell type
Description
Plots the number of (including unconfident) labels in 'full_mode'. Saves as 'cell_type_occur_unthreshold.pdf'
Usage
plot_occur_unthreshold(cell_type_info, resultsdir, weights)
Arguments
cell_type_info
cell type information and profiles (see get_cell_type_info)
resultsdir
output directory
weights
a dataframe of RCTD output weights (stored in the RCTD object)
dmcable/RCTD documentation built on Feb. 24, 2024, 11:03 p.m.
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| plot_occur_unthreshold | R Documentation |
Barplot of the counts for each cell type
Description
Plots the number of (including unconfident) labels in 'full_mode'. Saves as 'cell_type_occur_unthreshold.pdf'
Usage
plot_occur_unthreshold(cell_type_info, resultsdir, weights)
Arguments
cell_type_info |
cell type information and profiles (see |
resultsdir |
output directory |
weights |
a dataframe of RCTD output weights (stored in the RCTD object) |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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