plot_gene_raw: Makes a spatial plot of continuous gene expression for a...
In dmcable/RCTD: SpatialeXpressionR: Cell type identification and cell type-specific differential expression in spatial transcriptomics
plot_gene_raw R Documentation
Makes a spatial plot of continuous gene expression for a particular gene
Description
Units counts per 500
Usage
plot_gene_raw(myRCTD, gene, cell_type, ymax = 10)
Arguments
myRCTD
RCTD object containing de_results, after running CSIDE
gene
gene to be plotted
cell_type
cell_type to be plotted (only single cell type pixels)
ymax
(default 10) maximum expression (in counts per 500) for color scale
Value
gene expression plot
dmcable/RCTD documentation built on Feb. 24, 2024, 11:03 p.m.
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| plot_gene_raw | R Documentation |
Makes a spatial plot of continuous gene expression for a particular gene
Description
Units counts per 500
Usage
plot_gene_raw(myRCTD, gene, cell_type, ymax = 10)
Arguments
myRCTD |
|
gene |
gene to be plotted |
cell_type |
cell_type to be plotted (only single cell type pixels) |
ymax |
(default 10) maximum expression (in counts per 500) for color scale |
Value
gene expression plot
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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