R/cooler.R

In dozmorovlab/HiCcompare: HiCcompare: Joint normalization and comparative analysis of multiple Hi-C datasets

#' Hi-C data in the cooler format
#'
#' Contains Hi-C data for the entire genome from the Dixon2012-H1hESC-HindIII-allreps-filtered.1000kb.cool file.
#'
#' @source Data from the Index of Coolers. \url{ftp://cooler.csail.mit.edu/coolers/hg19/Dixon2012-H1hESC-HindIII-allreps-filtered.1000kb.cool}
#'
#' @format A matrix with 4011620 rows and 7 columns in BEDPE format.
#' @return A matrix.

#'
"cooler"