R/hmec.IS.R

In dozmorovlab/HiCcompare: HiCcompare: Joint normalization and comparative analysis of multiple Hi-C datasets

#' Hi-C data from HMEC cell line - chromosome 22 at 500kb resolution
#'
#' An InteractionSet object 2490 interactions and 1 metadata column
#'     containing the Interaction Frequencies
#'
#' @format An InteractionSet with 2490 rows and 1 metadata column:
#'     \describe{
#'     \item{IF}{The Interaction Frequency - number of read counts found
#'          for the interaction between region1 and region2}
#'  }
#' @source Data from the Aiden Lab. See their website at
#'     \url{https://www.aidenlab.org/}
#'      Or the the GEO link to download the data
#'     \url{https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE63525}
#'
#' @return A matrix

#'
"hmec.IS"