classify_n_times: Rerun a model generator and classifier on a training/testing...

In elsayed-lab/hpgltools: A pile of (hopefully) useful R functions

Rerun a model generator and classifier on a training/testing set multiple times.

Description

Rerun a model generator and classifier on a training/testing set multiple times.

Usage

classify_n_times(
  full_df,
  interesting_meta,
  outcome_column = "finaloutcome",
  p = 0.4,
  list = FALSE,
  formula_string = NULL,
  run_times = 10,
  method = "xgbTree",
  sampler = "cv",
  sample_number = 10,
  tuner = NULL,
  state = NULL,
  ...
)

Arguments

full_df	The matrix of preProcessed() data.
interesting_meta	dataframe of metadata of potential interest.
outcome_column	metadata column of interest.
p	The proportion of training/testing
list	How to return the partitions.
formula_string	Optional formula string, otherwise genrated on thee fly.
run_times	How many times to repeat this process
method	Modelling method to employ with caret.
sampler	Sampler to employ, bootstrap or cv right now.
sample_number	How many times to use the sampler
tuner	Tuning arguments for the method above.
state	When provided, passes the state of the data to the return so it may be reported later.
...	Others, currently unused I think

elsayed-lab/hpgltools documentation built on May 9, 2024, 5:02 a.m.