make_id2gomap: Make a go mapping from IDs in a format suitable for topGO.

In elsayed-lab/hpgltools: A pile of (hopefully) useful R functions

Make a go mapping from IDs in a format suitable for topGO.

Description

When using a non-supported organism, one must write out mappings in the format expected by topgo. This handles that process and gives a summary of the new table.

Usage

make_id2gomap(
  goid_map = "reference/go/id2go.map",
  go_db = NULL,
  overwrite = FALSE
)

Arguments

goid_map	TopGO mapping file.
go_db	If there is no goid_map, create it with this data frame.
overwrite	Rewrite the mapping file?

Value

Summary of the new goid table.

See Also

[topGO]

elsayed-lab/hpgltools documentation built on May 9, 2024, 5:02 a.m.