make_kegg_df: Use pathfindR to get a dataframe of KEGG IDs.
In elsayed-lab/hpgltools: A pile of (hopefully) useful R functions
View source: R/annotation_kegg.R
make_kegg_df R Documentation
Use pathfindR to get a dataframe of KEGG IDs.
Description
The various KEGG conversion methods from KEGGREST appear to only work
for a small subset of species now. This uses a different query format to get
a less flexible version of the same information. But at least it works.
Usage
make_kegg_df(org_code)
Arguments
org_code
Organism code from KEGG.
Value
Dataframe of gene IDs to KEGG IDs.
elsayed-lab/hpgltools documentation built on May 9, 2024, 5:02 a.m.
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View source: R/annotation_kegg.R
| make_kegg_df | R Documentation |
Use pathfindR to get a dataframe of KEGG IDs.
Description
The various KEGG conversion methods from KEGGREST appear to only work for a small subset of species now. This uses a different query format to get a less flexible version of the same information. But at least it works.
Usage
make_kegg_df(org_code)
Arguments
org_code |
Organism code from KEGG. |
Value
Dataframe of gene IDs to KEGG IDs.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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