map_kegg_dbs: Maps KEGG identifiers to ENSEMBL gene ids.
In elsayed-lab/hpgltools: A pile of (hopefully) useful R functions
View source: R/annotation_kegg.R
map_kegg_dbs R Documentation
Maps KEGG identifiers to ENSEMBL gene ids.
Description
Takes a list of KEGG gene identifiers and returns a list of ENSEMBL
ids corresponding to those genes.
Usage
map_kegg_dbs(kegg_ids)
Arguments
kegg_ids
List of KEGG identifiers to be mapped.
Value
Ensembl IDs as a character list.
See Also
[KEGGREST::keggGet()]
Examples
kegg_df <- load_kegg_annotations(species = "coli")
kegg_ids <- head(kegg_df[["kegg_geneid"]])
mapped <- map_kegg_dbs(kegg_ids)
mapped
elsayed-lab/hpgltools documentation built on May 9, 2024, 5:02 a.m.
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View source: R/annotation_kegg.R
| map_kegg_dbs | R Documentation |
Maps KEGG identifiers to ENSEMBL gene ids.
Description
Takes a list of KEGG gene identifiers and returns a list of ENSEMBL ids corresponding to those genes.
Usage
map_kegg_dbs(kegg_ids)
Arguments
kegg_ids |
List of KEGG identifiers to be mapped. |
Value
Ensembl IDs as a character list.
See Also
[KEGGREST::keggGet()]
Examples
kegg_df <- load_kegg_annotations(species = "coli")
kegg_ids <- head(kegg_df[["kegg_geneid"]])
mapped <- map_kegg_dbs(kegg_ids)
mapped
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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