simple_motifRG: Run motifRG on a fasta file.

In elsayed-lab/hpgltools: A pile of (hopefully) useful R functions

Run motifRG on a fasta file.

Description

Run motifRG on a fasta file.

Usage

simple_motifRG(
  input_fasta,
  control_fasta,
  maximum = 3,
  title = "Motifs of XXX",
  prefix = "motif",
  genome = "BSgenome.Hsapiens.UCSC.hg19"
)

Arguments

input_fasta	Input file.
control_fasta	control file.
maximum	3
title	Output image title.
prefix	Prefix for the output files.
genome	Package containing the full genome.

See Also

[motifRG]

elsayed-lab/hpgltools documentation built on May 9, 2024, 5:02 a.m.