getExternalIDs: Get External Database IDs of nodes

In frankkramer-lab/Multipath: Pathway Data Integration With Influencing Knowledge Using Multi-Layered Graphs

Get External Database IDs of nodes

Description

Get External Database IDs of nodes

Usage

getExternalIDs(biopax, nodes, database = NULL)

Arguments

biopax	The biopax object
nodes	The list of internal IDs of the nodes
database	The name of the database. If missing, the list of all external ids of all databases will be returned.

Value

A dataframe with the mappings between the internal and external IDs

Examples

## Not run:  
biopax=readBiopax(pi3k.owl)
getExternalIDs(wntBiopax,c("Protein1","Protein2"),"UniProt")

## End(Not run)

frankkramer-lab/Multipath documentation built on April 30, 2023, 6:08 p.m.