getKeggOmimRelation: Gets the genes and diseases that are referenced to each...
In frankkramer-lab/Multipath: Pathway Data Integration With Influencing Knowledge Using Multi-Layered Graphs
getKeggOmimRelation R Documentation
Gets the genes and diseases that are referenced to each other. Genes are extracted from the graph
Description
Gets the genes and diseases that are referenced to each other. Genes are extracted from the graph
Usage
getKeggOmimRelation(g, biopax)
Arguments
g
A Mully Graph Object
biopax
A Biopax Object
Value
A Dataframe with kegggenes ids and omim ids
Note
must be preceded by addGenesLayer(g,biopax) function
Author(s)
Mohammad Al Maaz
Examples
biopax=readBiopax("wnt.owl")
pathwayID=listPathways(biopax)$id[1]
g=Multipath::pathway2Mully(biopax,pathwayID)
g=addGenesLayer(g,biopax)
dataframe = getKeggOmimRelation(g,biopax)
frankkramer-lab/Multipath documentation built on April 30, 2023, 6:08 p.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
| getKeggOmimRelation | R Documentation |
Gets the genes and diseases that are referenced to each other. Genes are extracted from the graph
Description
Gets the genes and diseases that are referenced to each other. Genes are extracted from the graph
Usage
getKeggOmimRelation(g, biopax)
Arguments
g |
A Mully Graph Object |
biopax |
A Biopax Object |
Value
A Dataframe with kegggenes ids and omim ids
Note
must be preceded by addGenesLayer(g,biopax) function
Author(s)
Mohammad Al Maaz
Examples
biopax=readBiopax("wnt.owl")
pathwayID=listPathways(biopax)$id[1]
g=Multipath::pathway2Mully(biopax,pathwayID)
g=addGenesLayer(g,biopax)
dataframe = getKeggOmimRelation(g,biopax)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.