getUPKBtoDB: Get UniProt Proteins to DrugBank Drugs relations from UniProt

In frankkramer-lab/Multipath: Pathway Data Integration With Influencing Knowledge Using Multi-Layered Graphs

Get UniProt Proteins to DrugBank Drugs relations from UniProt

Description

Get UniProt Proteins to DrugBank Drugs relations from UniProt

Usage

getUPKBtoDB(up, proteinList, drugList)

Arguments

up	The UniProt.ws Object
proteinList	The list of UniProt Ids of the proteins
drugList	The ID of the DrugBank drug entry starting with "DB". This argument can be either a string (one drug) or a list of strings (multiple drugs).

Value

A dataframe containing the connections between UniProt proteins and DrugBank drugs retrieved from UniProt

Note

Should be preceded by UniProt.ws() to get the UniProt.ws Object

Examples

## Not run:  
up=UniProt.ws()
getUPKBtoDB(up,c("P02747","P00734","P07204"),c("DB00001","DB00002"))

## End(Not run)

frankkramer-lab/Multipath documentation built on April 30, 2023, 6:08 p.m.