pathway2Mully: Build a mully graph from a given pathway

In frankkramer-lab/Multipath: Pathway Data Integration With Influencing Knowledge Using Multi-Layered Graphs

Build a mully graph from a given pathway

Description

Build a mully graph from a given pathway

Usage

pathway2Mully(biopax, pathwayID)

Arguments

biopax	The BioPaX object containing the parsed data from an OWL file. This can be obtained using readBiopax(filepath)
pathwayID	The ID of the pathway in the biopax object

Value

A mully graph built from the given pathway

Note

This should be preceded by readBiopax(filepath) to obtain the biopax object

Examples

## Not run:  
biopax=readBiopax(pi3k.owl)
pi3kmully=pathway2mully(biopax,"pathway1")

## End(Not run)

frankkramer-lab/Multipath documentation built on April 30, 2023, 6:08 p.m.